ISDA: 4NIE

Deposition Date 2013-11-06

Release Date 2013-12-11

Last Version Date 2024-03-20

Entry Detail

PDB ID:

4NIE

Keywords:

TRANSCRIPTION/AGONIST

Title:

Crystal structure of the orphan nuclear receptor ROR(gamma)t ligand-binding domain in complex with small molecule ligand

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.01 Å

R-Value Free:

0.24

R-Value Work:

0.20

R-Value Observed:

0.20

Space Group:

P 21 21 21

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Nuclear receptor ROR-gamma
Gene (Uniprot):RORC
Chain IDs:A, B
Chain Length:262
Number of Molecules:2
Biological Source:Homo sapiens

UniProt ID:P51449 Pfam ID:PF00104

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Peptide from Nuclear receptor coactivator 2
Chain IDs:C, D
Chain Length:12
Number of Molecules:2
Biological Source:Homo sapiens

UniProt ID:Q15596

Ligand Molecules

DMX

NBH

Primary Citation

Discovery of Tertiary Amine and Indole Derivatives as Potent ROR gamma t Inverse Agonists.

Yang, T, Liu, Q, Cheng, Y, Cai, W, Ma, Y, Yang, L, Wu, Q, Orband-Miller, L.A, Zhou, L, Xiang, Z, Huxdorf, M, Zhang, W, Zhang, J, Xiang, J.N, Leung, S, Qiu, Y, Zhong, Z, Elliott, J.D, Lin, X, Wang, Y.Show

Acs Med.Chem.Lett. 5 65 68 (2014)

PMID: 24900774 DOI: 10.1021/ml4003875

Abstact

A novel series of tertiary amines as retinoid-related orphan receptor gamma-t (RORγt) inverse agonists was discovered through agonist/inverse agonist conversion. The level of RORγt inhibition can be enhanced by modulating the conformational disruption of H12 in RORγt LBD. Linker exploration and rational design led to the discovery of more potent indole-based RORγt inverse agonists.

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Primary Citation of related structures

Abstact

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