4NCW image
Deposition Date 2013-10-25
Release Date 2014-03-12
Last Version Date 2023-09-20
Entry Detail
PDB ID:
4NCW
Keywords:
Title:
foldon domain wild type C-conjugate
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.30 Å
R-Value Free:
0.19
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
C 1 2 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Fibritin
Chain IDs:A, B, C
Chain Length:27
Number of Molecules:3
Biological Source:Enterobacteria phage T4
Ligand Molecules
Primary Citation
Versatile C(3)-symmetric scaffolds and their use for covalent stabilization of the foldon trimer.
Org.Biomol.Chem. 12 2606 2614 (2014)
PMID: 24637609 DOI: 10.1039/c3ob42251h

Abstact

C3-Symmetric trimesic acid scaffolds, functionalized with bromoacetyl, aminooxyacetyl and azidoacetyl moieties, respectively, were synthesized and compared regarding their utility for the trivalent presentation of peptides using three different chemoselective ligation reactions, i.e. thioether and oxime formation, as well as the "click" reaction. The latter ligation method was then used to covalently stabilize the trimer of foldon, a 27 amino acid trimerization domain of bacteriophage T4 fibritin, by linking the three foldon monomers to the triazido-functionalized trimesic acid scaffold. This reaction dramatically enhanced the thermal stability of the trimer, while maintaining the correct fold, as demonstrated by CD spectroscopy and X-ray crystal structure analysis, respectively, of the foldon-scaffold conjugates.

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