4NAU image
Deposition Date 2013-10-22
Release Date 2014-03-12
Last Version Date 2024-02-28
Entry Detail
PDB ID:
4NAU
Title:
S. aureus CoaD with Inhibitor
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.33 Å
R-Value Free:
0.32
R-Value Work:
0.25
R-Value Observed:
0.25
Space Group:
C 2 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Phosphopantetheine adenylyltransferase
Gene (Uniprot):coaD
Chain IDs:A, B, C
Chain Length:160
Number of Molecules:3
Biological Source:Staphylococcus aureus
Primary Citation
Discovery of Inhibitors of 4'-Phosphopantetheine Adenylyltransferase (PPAT) To Validate PPAT as a Target for Antibacterial Therapy.
Antimicrob.Agents Chemother. 57 6005 6015 (2013)
PMID: 24041904 DOI: 10.1128/AAC.01661-13

Abstact

Inhibitors of 4'-phosphopantetheine adenylyltransferase (PPAT) were identified through high-throughput screening of the AstraZeneca compound library. One series, cycloalkyl pyrimidines, showed inhibition of PPAT isozymes from several species, with the most potent inhibition of enzymes from Gram-positive species. Mode-of-inhibition studies with Streptococcus pneumoniae and Staphylococcus aureus PPAT demonstrated representatives of this series to be reversible inhibitors competitive with phosphopantetheine and uncompetitive with ATP, binding to the enzyme-ATP complex. The potency of this series was optimized using structure-based design, and inhibition of cell growth of Gram-positive species was achieved. Mode-of-action studies, using generation of resistant mutants with targeted sequencing as well as constructs that overexpress PPAT, demonstrated that growth suppression was due to inhibition of PPAT. An effect on bacterial burden was demonstrated in mouse lung and thigh infection models, but further optimization of dosing requirements and compound properties is needed before these compounds can be considered for progress into clinical development. These studies validated PPAT as a novel target for antibacterial therapy.

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