4NAG image
Deposition Date 2013-10-22
Release Date 2014-04-30
Last Version Date 2024-11-27
Entry Detail
PDB ID:
4NAG
Title:
Xanthomonins I III are a New Class of Lasso Peptides Featuringa Seven-Membered Macrolactam Ring
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
0.81 Å
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Xanthomonin I
Chain IDs:A, B
Chain Length:16
Number of Molecules:2
Biological Source:Xanthomonas gardneri
Ligand Molecules
Primary Citation
Xanthomonins I-III: A New Class of Lasso Peptides with a Seven-Residue Macrolactam Ring.
Angew.Chem.Int.Ed.Engl. 53 2230 2234 (2014)
PMID: 24446383 DOI: 10.1002/anie.201309267

Abstact

Lasso peptides belong to the class of ribosomally synthesized and post-translationally modified peptides. Their common distinguishing feature is an N-terminal macrolactam ring that is threaded by the C-terminal tail. This lasso fold is maintained through steric interactions. The isolation and characterization of xanthomonins I-III, the first lasso peptides featuring macrolactam rings consisting of only seven amino acids, is now presented. The crystal structure of xanthomonin I and the NMR structure of xanthomonin II were also determined. A total of 25 variants of xanthomonin II were generated to probe different aspects of the biosynthesis, stability, and fold maintenance. These mutational studies reveal the limits such a small ring imposes on the threading and show that every plug amino acid larger than serine is able to maintain a heat-stable lasso fold in the xanthomonin II scaffold.

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Primary Citation of related structures