ISDA: 4N7E

Deposition Date 2013-10-15

Release Date 2014-01-22

Last Version Date 2024-10-30

Entry Detail

PDB ID:

4N7E

Keywords:

SIGNALING PROTEIN

Title:

Crystal structure of the Vps10p domain of human sortilin/NTS3 in complex with AF38469

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)

Host Organism:

Homo Sapiens

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.70 Å

R-Value Free:

0.24

R-Value Work:

0.20

R-Value Observed:

0.20

Space Group:

C 1 2 1

Download Validation Report

Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Sortilin
Gene (Uniprot):SORT1
Mutagens:V617M
Chain IDs:A
Chain Length:696
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:Q99523 Pfam ID:PF15902, PF15901

Modified Residue

Compound ID	Chain ID	Parent Comp ID	Details	2D Image
ASN	A	ASN	GLYCOSYLATION SITE

Ligand Molecules

2JQ

PGE

Primary Citation

The identification of AF38469: An orally bioavailable inhibitor of the VPS10P family sorting receptor Sortilin.

Schrder, T.J, Christensen, S, Lindberg, S, Langgard, M, David, L, Maltas, P.J, Eskildsen, J, Jacobsen, J, Tagmose, L, Simonsen, K.B, Biilmann Rnn, L.C, de Jong, I.E, Malik, I.J, Karlsson, J.J, Bundgaard, C, Egebjerg, J, Stavenhagen, J.B, Strandbygard, D, Thirup, S, Andersen, J.L, Uppalanchi, S, Pervaram, S, Kasturi, S.P, Eradi, P, Sakumudi, D.R, Watson, S.P.Show

Bioorg.Med.Chem.Lett. 24 177 180 (2014)

PMID: 24355129 DOI: 10.1016/j.bmcl.2013.11.046

Abstact

The identification of the novel, selective, orally bioavailable Sortilin inhibitor AF38469 is described. Structure-activity relationships and syntheses are reported, along with an X-ray crystal structure of the sortilin-AF38469 protein-inhibitor complex.

Legend

Protein

Chemical

Disease

Primary Citation of related structures

Abstact

Feedback Form