4N4Z image
Entry Detail
PDB ID:
4N4Z
Keywords:
Title:
Trypanosoma brucei procathepsin B structure solved by Serial Microcrystallography using synchrotron radiation
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2013-10-08
Release Date:
2014-02-05
Method Details:
Experimental Method:
Resolution:
3.30 Å
R-Value Free:
0.25
R-Value Work:
0.19
R-Value Observed:
0.20
Space Group:
P 42 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Cysteine peptidase C (CPC)
Chain IDs:A
Chain Length:340
Number of Molecules:1
Biological Source:Trypanosoma brucei brucei
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
ASN A ASN GLYCOSYLATION SITE
Ligand Molecules
Primary Citation
Serial crystallography on in vivo grown microcrystals using synchrotron radiation.
IUCrJ 1 87 94 (2014)
PMID: 25075324 DOI: 10.1107/S2052252513033939

Abstact

Crystal structure determinations of biological macromolecules are limited by the availability of sufficiently sized crystals and by the fact that crystal quality deteriorates during data collection owing to radiation damage. Exploiting a micrometre-sized X-ray beam, high-precision diffractometry and shutterless data acquisition with a pixel-array detector, a strategy for collecting data from many micrometre-sized crystals presented to an X-ray beam in a vitrified suspension is demonstrated. By combining diffraction data from 80 Trypanosoma brucei procathepsin B crystals with an average volume of 9 µm(3), a complete data set to 3.0 Å resolution has been assembled. The data allowed the refinement of a structural model that is consistent with that previously obtained using free-electron laser radiation, providing mutual validation. Further improvements of the serial synchrotron crystallography technique and its combination with serial femtosecond crystallography are discussed that may allow the determination of high-resolution structures of micrometre-sized crystals.

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