4N4W image
Deposition Date 2013-10-08
Release Date 2014-01-22
Last Version Date 2024-11-20
Entry Detail
PDB ID:
4N4W
Title:
Structure of the human smoothened receptor in complex with SANT-1.
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.80 Å
R-Value Free:
0.25
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
C 2 2 21
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Cytochrome b(562),Smoothened homolog
Gene (Uniprot):cybC, SMO
Mutagens:M29W, H124I, R128L
Chain IDs:A
Chain Length:475
Number of Molecules:1
Biological Source:Shigella flexneri 5 str. 8401, Homo sapiens
Primary Citation
Structural basis for Smoothened receptor modulation and chemoresistance to anticancer drugs.
Nat Commun 5 4355 4355 (2014)
PMID: 25008467 DOI: 10.1038/ncomms5355

Abstact

The Smoothened receptor (SMO) mediates signal transduction in the hedgehog pathway, which is implicated in normal development and carcinogenesis. SMO antagonists can suppress the growth of some tumours; however, mutations at SMO have been found to abolish their antitumour effects, a phenomenon known as chemoresistance. Here we report three crystal structures of human SMO bound to the antagonists SANT1 and Anta XV, and the agonist, SAG1.5, at 2.6-2.8 Å resolution. The long and narrow cavity in the transmembrane domain of SMO harbours multiple ligand binding sites, where SANT1 binds at a deeper site as compared with other ligands. Distinct interactions at D473(6.54f) elucidated the structural basis for the differential effects of chemoresistance mutations on SMO antagonists. The agonist SAG1.5 induces a conformational rearrangement of the binding pocket residues, which could contribute to SMO activation. Collectively, these studies reveal the structural basis for the modulation of SMO by small molecules.

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Primary Citation of related structures