4ML3 image
Deposition Date 2013-09-06
Release Date 2014-02-19
Last Version Date 2023-09-20
Entry Detail
PDB ID:
4ML3
Title:
X-ray structure of ComE D58A REC domain from Streptococcus pneumoniae
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.15 Å
R-Value Free:
0.32
R-Value Work:
0.27
R-Value Observed:
0.27
Space Group:
P 63
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Response regulator
Gene (Uniprot):comE
Mutagens:D58A
Chain IDs:A, B, C, D
Chain Length:143
Number of Molecules:4
Biological Source:Streptococcus pneumoniae
Ligand Molecules
Primary Citation
Structural insights into the dimerization of the response regulator ComE from Streptococcus pneumoniae.
Nucleic Acids Res. 42 5302 5313 (2014)
PMID: 24500202 DOI: 10.1093/nar/gku110

Abstact

Natural transformation contributes to the maintenance and to the evolution of the bacterial genomes. In Streptococcus pneumoniae, this function is reached by achieving the competence state, which is under the control of the ComD-ComE two-component system. We present the crystal and solution structures of ComE. We mimicked the active and non-active states by using the phosphorylated mimetic ComE(D58E) and the unphosphorylatable ComE(D58A) mutants. In the crystal, full-length ComE(D58A) dimerizes through its canonical REC receiver domain but with an atypical mode, which is also adopted by the isolated REC(D58A) and REC(D58E). The LytTR domain adopts a tandem arrangement consistent with the two direct repeats of its promoters. However ComE(D58A) is monomeric in solution, as seen by SAXS, by contrast to ComE(D58E) that dimerizes. For both, a relative mobility between the two domains is assumed. Based on these results we propose two possible ways for activation of ComE by phosphorylation.

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Primary Citation of related structures