4MGU image
Deposition Date 2013-08-28
Release Date 2013-10-30
Last Version Date 2024-02-28
Entry Detail
PDB ID:
4MGU
Keywords:
Title:
Crystal structure of Acheta domesticus Densovirus
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
3.50 Å
R-Value Free:
0.29
R-Value Work:
0.29
R-Value Observed:
0.29
Space Group:
P 42 21 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Structural protein VP2
Chain IDs:A
Chain Length:428
Number of Molecules:1
Biological Source:Acheta domestica densovirus
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(P*TP*TP*T)-3')
Chain IDs:B (auth: C)
Chain Length:3
Number of Molecules:1
Biological Source:Acheta domesticus
Ligand Molecules
Primary Citation
The structure and host entry of an invertebrate parvovirus.
J.Virol. 87 12523 12530 (2013)
PMID: 24027306 DOI: 10.1128/JVI.01822-13

Abstact

The 3.5-Å resolution X-ray crystal structure of mature cricket parvovirus (Acheta domesticus densovirus [AdDNV]) has been determined. Structural comparisons show that vertebrate and invertebrate parvoviruses have evolved independently, although there are common structural features among all parvovirus capsid proteins. It was shown that raising the temperature of the AdDNV particles caused a loss of their genomes. The structure of these emptied particles was determined by cryo-electron microscopy to 5.5-Å resolution, and the capsid structure was found to be the same as that for the full, mature virus except for the absence of the three ordered nucleotides observed in the crystal structure. The viral protein 1 (VP1) amino termini could be externalized without significant damage to the capsid. In vitro, this externalization of the VP1 amino termini is accompanied by the release of the viral genome.

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Chemical

Disease

Primary Citation of related structures
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