4MDT image
Entry Detail
PDB ID:
4MDT
Keywords:
Title:
Structure of LpxC bound to the reaction product UDP-(3-O-(R-3-hydroxymyristoyl))-glucosamine
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2013-08-23
Release Date:
2013-10-16
Method Details:
Experimental Method:
Resolution:
2.59 Å
R-Value Free:
0.24
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
Mutations:C125S
Chain IDs:A, B, C, D
Chain Length:305
Number of Molecules:4
Biological Source:Escherichia coli
Primary Citation
Structure of the Bacterial Deacetylase LpxC Bound to the Nucleotide Reaction Product Reveals Mechanisms of Oxyanion Stabilization and Proton Transfer.
J.Biol.Chem. 288 34073 34080 (2013)
PMID: 24108127 DOI: 10.1074/jbc.M113.513028

Abstact

The emergence of antibiotic-resistant strains of pathogenic bacteria is an increasing threat to global health that underscores an urgent need for an expanded antibacterial armamentarium. Gram-negative bacteria, such as Escherichia coli, have become increasingly important clinical pathogens with limited treatment options. This is due in part to their lipopolysaccharide (LPS) outer membrane components, which dually serve as endotoxins while also protecting Gram-negative bacteria from antibiotic entry. The LpxC enzyme catalyzes the committed step of LPS biosynthesis, making LpxC a promising target for new antibacterials. Here, we present the first structure of an LpxC enzyme in complex with the deacetylation reaction product, UDP-(3-O-(R-3-hydroxymyristoyl))-glucosamine. These studies provide valuable insight into recognition of substrates and products by LpxC and a platform for structure-guided drug discovery of broad spectrum Gram-negative antibiotics.

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