4LVO image
Deposition Date 2013-07-26
Release Date 2014-05-07
Last Version Date 2024-11-27
Entry Detail
PDB ID:
4LVO
Title:
Crystal structure of PfSUB1-prodomain-NIMP.M7 Fab complex with added CaCl2
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.26 Å
R-Value Free:
0.23
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Subtilisin-like serine protease
Chain IDs:A
Chain Length:344
Number of Molecules:1
Biological Source:Plasmodium falciparum
Polymer Type:polypeptide(L)
Molecule:NIMP.M7 Fab light chain
Chain IDs:B
Chain Length:212
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Molecule:NIMP.M7 Fab heavy chain
Chain IDs:C
Chain Length:220
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Molecule:Subtilisin-like serine protease
Chain IDs:D (auth: P)
Chain Length:93
Number of Molecules:1
Biological Source:Plasmodium falciparum
Ligand Molecules
Primary Citation
The malaria parasite egress protease SUB1 is a calcium-dependent redox switch subtilisin.
Nat Commun 5 3726 3726 (2014)
PMID: 24785947 DOI: 10.1038/ncomms4726

Abstact

Malaria is caused by a protozoan parasite that replicates within an intraerythrocytic parasitophorous vacuole. Release (egress) of malaria merozoites from the host erythrocyte is a highly regulated and calcium-dependent event that is critical for disease progression. Minutes before egress, an essential parasite serine protease called SUB1 is discharged into the parasitophorous vacuole, where it proteolytically processes a subset of parasite proteins that play indispensable roles in egress and invasion. Here we report the first crystallographic structure of Plasmodium falciparum SUB1 at 2.25 Å, in complex with its cognate prodomain. The structure highlights the basis of the calcium dependence of SUB1, as well as its unusual requirement for interactions with substrate residues on both prime and non-prime sides of the scissile bond. Importantly, the structure also reveals the presence of a solvent-exposed redox-sensitive disulphide bridge, unique among the subtilisin family, that likely acts as a regulator of protease activity in the parasite.

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Primary Citation of related structures