4L7R image
Entry Detail
PDB ID:
4L7R
Title:
Human artd3 (parp3) - catalytic domain in complex with inhibitor ME0400
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2013-06-14
Release Date:
2014-02-19
Method Details:
Experimental Method:
Resolution:
2.20 Å
R-Value Free:
0.22
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Poly [ADP-ribose] polymerase 3
Chain IDs:A
Chain Length:357
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Chemical Probes to Study ADP-Ribosylation: Synthesis and Biochemical Evaluation of Inhibitors of the Human ADP-Ribosyltransferase ARTD3/PARP3.
J.Med.Chem. 56 9556 9568 (2013)
PMID: 24188023 DOI: 10.1021/jm401394u

Abstact

The racemic 3-(4-oxo-3,4-dihydroquinazolin-2-yl)-N-[1-(pyridin-2-yl)ethyl]propanamide, 1, has previously been identified as a potent but unselective inhibitor of diphtheria toxin-like ADP-ribosyltransferase 3 (ARTD3). Herein we describe synthesis and evaluation of 55 compounds in this class. It was found that the stereochemistry is of great importance for both selectivity and potency and that substituents on the phenyl ring resulted in poor solubility. Certain variations at the meso position were tolerated and caused a large shift in the binding pose. Changes to the ethylene linker that connects the quinazolinone to the amide were also investigated but proved detrimental to binding. By combination of synthetic organic chemistry and structure-based design, two selective inhibitors of ARTD3 were discovered.

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Primary Citation of related structures