4L17 image
Deposition Date 2013-06-02
Release Date 2013-08-14
Last Version Date 2024-10-30
Entry Detail
PDB ID:
4L17
Title:
GluA2-L483Y-A665C ligand-binding domain in complex with the antagonist DNQX
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.80 Å
R-Value Free:
0.24
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 2 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Glutamate receptor 2
Gene (Uniprot):Gria2
Mutations:L94Y, A153C
Chain IDs:A, B (auth: C), C (auth: E), D (auth: G)
Chain Length:263
Number of Molecules:4
Biological Source:Rattus norvegicus
Primary Citation
A conformational intermediate in glutamate receptor activation.
Neuron 79 492 503 (2013)
PMID: 23931998 DOI: 10.1016/j.neuron.2013.06.003

Abstact

Ionotropic glutamate receptors (iGluRs) transduce the chemical signal of neurotransmitter release into membrane depolarization at excitatory synapses in the brain. The opening of the transmembrane ion channel of these ligand-gated receptors is driven by conformational transitions that are induced by the association of glutamate molecules to the ligand-binding domains (LBDs). Here, we describe the crystal structure of a GluA2 LBD tetramer in a configuration that involves an ∼30° rotation of the LBD dimers relative to the crystal structure of the full-length receptor. The configuration is stabilized by an engineered disulfide crosslink. Biochemical and electrophysiological studies on full-length receptors incorporating either this crosslink or an engineered metal bridge show that this LBD configuration corresponds to an intermediate state of receptor activation. GluA2 activation therefore involves a combination of both intra-LBD (cleft closure) and inter-LBD dimer conformational transitions. Overall, these results provide a comprehensive structural characterization of an iGluR intermediate state.

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