4KXZ image
Entry Detail
PDB ID:
4KXZ
Keywords:
Title:
crystal structure of tgfb2 in complex with GC2008.
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2013-05-28
Release Date:
2014-09-24
Method Details:
Experimental Method:
Resolution:
2.83 Å
R-Value Free:
0.22
R-Value Work:
0.18
Space Group:
P 21 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Transforming growth factor beta-2
Chain IDs:A, B, C (auth: D), D (auth: E)
Chain Length:112
Number of Molecules:4
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:GC1008 Heavy Chain
Chain IDs:E (auth: H), F (auth: J), G (auth: N), H (auth: Q)
Chain Length:224
Number of Molecules:4
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:GC1008 Light Chain
Chain IDs:I, J (auth: L), K (auth: M), L (auth: P)
Chain Length:215
Number of Molecules:4
Biological Source:Homo sapiens
Primary Citation
Structures of a pan-specific antagonist antibody complexed to different isoforms of TGF beta reveal structural plasticity of antibody-antigen interactions.
Protein Sci. 23 1698 1707 (2014)
PMID: 25209176 DOI: 10.1002/pro.2548

Abstact

Various important biological pathways are modulated by TGFβ isoforms; as such they are potential targets for therapeutic intervention. Fresolimumab, also known as GC1008, is a pan-TGFβ neutralizing antibody that has been tested clinically for several indications including an ongoing trial for focal segmental glomerulosclerosis. The structure of the antigen-binding fragment of fresolimumab (GC1008 Fab) in complex with TGFβ3 has been reported previously, but the structural capacity of fresolimumab to accommodate tight interactions with TGFβ1 and TGFβ2 was insufficiently understood. We report the crystal structure of the single-chain variable fragment of fresolimumab (GC1008 scFv) in complex with target TGFβ1 to a resolution of 3.00 Å and the crystal structure of GC1008 Fab in complex with TGFβ2 to 2.83 Å. The structures provide further insight into the details of TGFβ recognition by fresolimumab, give a clear indication of the determinants of fresolimumab pan-specificity and provide potential starting points for the development of isoform-specific antibodies using a fresolimumab scaffold.

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Primary Citation of related structures