4KKI image
Entry Detail
PDB ID:
4KKI
Title:
Crystal Structure of Haptocorrin in Complex with CNCbl
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2013-05-06
Release Date:
2013-07-17
Method Details:
Experimental Method:
Resolution:
2.35 Å
R-Value Free:
0.22
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 64
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Transcobalamin-1
Chain IDs:A
Chain Length:467
Number of Molecules:1
Biological Source:Homo sapiens
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
ASN A ASN GLYCOSYLATION SITE
Primary Citation
Structural basis for universal corrinoid recognition by the cobalamin transport protein haptocorrin.
J.Biol.Chem. 288 25466 25476 (2013)
PMID: 23846701 DOI: 10.1074/jbc.M113.483271

Abstact

Cobalamin (Cbl; vitamin B12) is an essential micronutrient synthesized only by bacteria. Mammals have developed a sophisticated uptake system to capture the vitamin from the diet. Cbl transport is mediated by three transport proteins: transcobalamin, intrinsic factor, and haptocorrin (HC). All three proteins have a similar overall structure but a different selectivity for corrinoids. Here, we present the crystal structures of human HC in complex with cyanocobalamin and cobinamide at 2.35 and 3.0 Å resolution, respectively. The structures reveal that many of the interactions with the corrin ring are conserved among the human Cbl transporters. However, the non-conserved residues Asn-120, Arg-357, and Asn-373 form distinct interactions allowing for stabilization of corrinoids other than Cbl. A central binding motif forms interactions with the e- and f-side chains of the corrin ring and is conserved in corrinoid-binding proteins of other species. In addition, the α- and β-domains of HC form several unique interdomain contacts and have a higher shape complementarity than those of intrinsic factor and transcobalamin. The stabilization of ligands by all of these interactions is reflected in higher melting temperatures of the protein-ligand complexes. Our structural analysis offers fundamental insights into the unique binding behavior of HC and completes the picture of Cbl interaction with its three transport proteins.

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