4KGX image
Entry Detail
PDB ID:
4KGX
Keywords:
Title:
The R state structure of E. coli ATCase with CTP bound
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2013-04-29
Release Date:
2013-11-27
Method Details:
Experimental Method:
Resolution:
2.20 Å
R-Value Free:
0.19
R-Value Work:
0.15
R-Value Observed:
0.15
Space Group:
P 3 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Aspartate carbamoyltransferase
Chain IDs:A, C
Chain Length:310
Number of Molecules:2
Biological Source:Escherichia coli
Polymer Type:polypeptide(L)
Description:Aspartate carbamoyltransferase regulatory chain
Chain IDs:B, D
Chain Length:153
Number of Molecules:2
Biological Source:Escherichia coli
Primary Citation
New Paradigm for Allosteric Regulation of Escherichia coli Aspartate Transcarbamoylase.
Biochemistry 52 8036 8047 (2013)
PMID: 24138583 DOI: 10.1021/bi401205n

Abstact

For nearly 60 years, the ATP activation and the CTP inhibition of Escherichia coli aspartate transcarbamoylase (ATCase) has been the textbook example of allosteric regulation. We present kinetic data and five X-ray structures determined in the absence and presence of a Mg(2+) concentration within the physiological range. In the presence of 2 mM divalent cations (Mg(2+), Ca(2+), Zn(2+)), CTP does not significantly inhibit the enzyme, while the allosteric activation by ATP is enhanced. The data suggest that the actual allosteric inhibitor of ATCase in vivo is the combination of CTP, UTP, and a divalent cation, and the actual allosteric activator is a divalent cation with ATP or ATP and GTP. The structural data reveals that two NTPs can bind to each allosteric site with a divalent cation acting as a bridge between the triphosphates. Thus, the regulation of ATCase is far more complex than previously believed and calls many previous studies into question. The X-ray structures reveal that the catalytic chains undergo essentially no alternations; however, several regions of the regulatory chains undergo significant structural changes. Most significant is that the N-terminal region of the regulatory chains exists in different conformations in the allosterically activated and inhibited forms of the enzyme. Here, a new model of allosteric regulation is proposed.

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