4K90 image
Deposition Date 2013-04-19
Release Date 2013-10-23
Last Version Date 2024-11-20
Entry Detail
PDB ID:
4K90
Keywords:
Title:
Extracellular metalloproteinase from Aspergillus
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.80 Å
R-Value Free:
0.19
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 65
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Extracellular metalloproteinase mep
Gene (Uniprot):mep
Chain IDs:A
Chain Length:389
Number of Molecules:1
Biological Source:Aspergillus fumigatus
Polymer Type:polypeptide(L)
Molecule:Extracellular metalloproteinase mep
Gene (Uniprot):mep
Chain IDs:B
Chain Length:215
Number of Molecules:1
Biological Source:Aspergillus fumigatus
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
ASN B ASN GLYCOSYLATION SITE
Primary Citation
A functional and structural study of the major metalloprotease secreted by the pathogenic fungus Aspergillus fumigatus.
Acta Crystallogr.,Sect.D 69 1946 1957 (2013)
PMID: 24100314 DOI: 10.1107/S0907444913017642

Abstact

Fungalysins are secreted fungal peptidases with the ability to degrade the extracellular matrix proteins elastin and collagen and are thought to act as virulence factors in diseases caused by fungi. Fungalysins constitute a unique family among zinc-dependent peptidases that bears low sequence similarity to known bacterial peptidases of the thermolysin family. The crystal structure of the archetype of the fungalysin family, Aspergillus fumigatus metalloprotease (AfuMep), has been obtained for the first time. The 1.8 Å resolution structure of AfuMep corresponds to that of an autoproteolyzed proenzyme with separate polypeptide chains corresponding to the N-terminal prodomain in a binary complex with the C-terminal zinc-bound catalytic domain. The prodomain consists of a tandem of cystatin-like folds whose C-terminal end is buried into the active-site cleft of the catalytic domain. The catalytic domain harbouring the key catalytic zinc ion and its ligands, two histidines and one glutamic acid, undergoes a conspicuous rearrangement of its N-terminal end during maturation. One key positively charged amino-acid residue and the C-terminal disulfide bridge appear to contribute to its structural-functional properties. Thus, structural, biophysical and biochemical analysis were combined to provide a deeper comprehension of the underlying properties of A. fumigatus fungalysin, serving as a framework for the as yet poorly known metallopeptidases from pathogenic fungi.

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Primary Citation of related structures