4K7W image
Deposition Date 2013-04-17
Release Date 2013-05-08
Last Version Date 2023-09-20
Entry Detail
PDB ID:
4K7W
Keywords:
Title:
Crystal structure of Zn3-hUb(human ubiquitin) adduct from a solution 100 mM zinc acetate/1.3 mM hUb
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.76 Å
R-Value Free:
0.26
R-Value Work:
0.19
R-Value Observed:
0.20
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:ubiquitin
Gene (Uniprot):UBC
Chain IDs:A, B, C
Chain Length:76
Number of Molecules:3
Biological Source:Homo sapiens
Primary Citation
Conformational selection of ubiquitin quaternary structures driven by zinc ions.
Chemistry 19 15480 15484 (2013)
PMID: 24123543 DOI: 10.1002/chem.201302229

Abstact

Zinc ions bridging two ubiquitin molecules (with His68 at the interface) contribute to select a subset of conformers from the noncovalent dimer ensemble, thus restricting quaternary structure dynamics, which hampers apo-protein crystallization. The type of selected conformer is shown to determine the crystal packing, which varies from orthorhombic to cubic symmetry.

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Primary Citation of related structures
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