ISDA

Deposition Date 2013-04-15

Release Date 2013-06-12

Last Version Date 2023-09-20

Entry Detail

PDB ID:

4K5O

Keywords:

HYDROLASE/HYDROLASE INHIBITOR

Title:

Phosphonic Arginine Mimetics as Inhibitors of the M1 Aminopeptidases from Plasmodium falciparum

Biological Source:

Source Organism:

Plasmodium falciparum FcB1/Columbia (Taxon ID: 186763)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.90 Å

R-Value Free:

0.24

R-Value Work:

0.18

R-Value Observed:

0.18

Space Group:

P 21 21 21

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:M1 family aminopeptidase
Gene (Uniprot):M1AAP
Mutations:N213Q, N223Q, H378P, N501Q, N795Q, N1069QQ
Chain IDs:A
Chain Length:895
Number of Molecules:1
Biological Source:Plasmodium falciparum FcB1/Columbia

UniProt ID:O96935 Pfam ID:PF17900, PF01433, PF11940, PF17432 EC:3.4.11.20

Ligand Molecules

1OT

GOL

Primary Citation

Synthesis and Structure-Activity Relationships of Phosphonic Arginine Mimetics as Inhibitors of the M1 and M17 Aminopeptidases from Plasmodium falciparum.

Kannan Sivaraman, K, Paiardini, A, Sienczyk, M, Ruggeri, C, Oellig, C.A, Dalton, J.P, Scammells, P.J, Drag, M, McGowan, S.Show

J.Med.Chem. 56 5213 5217 (2013)

PMID: 23713488 DOI: 10.1021/jm4005972

Abstact

The malaria parasite Plasmodium falciparum employs two metallo-aminopeptidases, PfA-M1 and PfA-M17, which are essential for parasite survival. Compounds that inhibit the activity of either enzyme represent leads for the development of new antimalarial drugs. Here we report the synthesis and structure-activity relationships of a small library of phosphonic acid arginine mimetics that probe the S1 pocket of both enzymes and map the necessary interactions that would be important for a dual inhibitor.

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Primary Citation of related structures