4JVG image
Deposition Date 2013-03-25
Release Date 2013-05-29
Last Version Date 2024-02-28
Entry Detail
PDB ID:
4JVG
Title:
B-Raf Kinase in Complex with Birb796
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.09 Å
R-Value Free:
0.29
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Serine/threonine-protein kinase B-raf
Gene (Uniprot):BRAF
Mutations:I543A, I544S, I551K, Q562R, L588N, K630S, F667E, Y673S, A688R, L706S, Q709R, S713E, L716E, S720E, P722S, K723G
Chain IDs:A (auth: B), B (auth: A), C, D
Chain Length:284
Number of Molecules:4
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Inhibitors that stabilize a closed RAF kinase domain conformation induce dimerization.
Nat.Chem.Biol. 9 428 436 (2013)
PMID: 23685672 DOI: 10.1038/nchembio.1257

Abstact

RAF kinases have a prominent role in cancer. Their mode of activation is complex but critically requires dimerization of their kinase domains. Unexpectedly, several ATP-competitive RAF inhibitors were recently found to promote dimerization and transactivation of RAF kinases in a RAS-dependent manner and, as a result, undesirably stimulate RAS/ERK pathway-mediated cell growth. The mechanism by which these inhibitors induce RAF kinase domain dimerization remains unclear. Here we describe bioluminescence resonance energy transfer-based biosensors for the extended RAF family that enable the detection of RAF dimerization in living cells. Notably, we demonstrate the utility of these tools for profiling kinase inhibitors that selectively modulate RAF dimerization and for probing structural determinants of RAF dimerization in vivo. Our findings, which seem generalizable to other kinase families allosterically regulated by kinase domain dimerization, suggest a model whereby ATP-competitive inhibitors mediate RAF dimerization by stabilizing a rigid closed conformation of the kinase domain.

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Primary Citation of related structures