4JQU image
Deposition Date 2013-03-20
Release Date 2013-05-29
Last Version Date 2023-09-20
Entry Detail
PDB ID:
4JQU
Title:
Crystal structure of Ubc7p in complex with the U7BR of Cue1p
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.81 Å
R-Value Free:
0.22
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Ubiquitin-conjugating enzyme E2 7
Gene (Uniprot):UBC7
Chain IDs:A
Chain Length:169
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae
Polymer Type:polypeptide(L)
Molecule:Coupling of ubiquitin conjugation to ER degradation protein 1
Gene (Uniprot):CUE1
Chain IDs:B
Chain Length:54
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae
Primary Citation
A Structurally Unique E2-Binding Domain Activates Ubiquitination by the ERAD E2, Ubc7p, through Multiple Mechanisms.
Mol.Cell 50 516 527 (2013)
PMID: 23665230 DOI: 10.1016/j.molcel.2013.04.004

Abstact

Cue1p is an integral component of yeast endoplasmic reticulum (ER)-associated degradation (ERAD) ubiquitin ligase (E3) complexes. It tethers the ERAD ubiquitin-conjugating enzyme (E2), Ubc7p, to the ER and prevents its degradation, and also activates Ubc7p via unknown mechanisms. We have now determined the crystal structure of the Ubc7p-binding region (U7BR) of Cue1p with Ubc7p. The U7BR is a unique E2-binding domain that includes three α-helices that interact extensively with the "backside" of Ubc7p. Residues essential for E2 binding are also required for activation of Ubc7p and for ERAD. We establish that the U7BR stimulates both RING-independent and RING-dependent ubiquitin transfer from Ubc7p. Moreover, the U7BR enhances ubiquitin-activating enzyme (E1)-mediated charging of Ubc7p with ubiquitin. This demonstrates that an essential component of E3 complexes can simultaneously bind to E2 and enhance its loading with ubiquitin. These findings provide mechanistic insights into how ubiquitination can be stimulated.

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