4JBU image
Deposition Date 2013-02-20
Release Date 2013-05-08
Last Version Date 2023-09-20
Entry Detail
PDB ID:
4JBU
Keywords:
Title:
1.65A structure of the T3SS tip protein LcrV (G28-D322, C273S) from Yersinia pestis
Biological Source:
Source Organism:
Yersinia pestis (Taxon ID: 632)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.65 Å
R-Value Free:
0.22
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Virulence-associated V antigen
Gene (Uniprot):lcrV
Mutagens:C273S
Chain IDs:A
Chain Length:298
Number of Molecules:1
Biological Source:Yersinia pestis
Ligand Molecules
Primary Citation
Structure of the Yersinia pestis tip protein LcrV refined to 1.65A resolution
Acta Crystallogr.,Sect.F 69 477 481 (2013)
PMID: 23695558 DOI: 10.1107/S1744309113008579

Abstact

The human pathogen Yersinia pestis requires the assembly of the type III secretion system (T3SS) for virulence. The structural component of the T3SS contains an external needle and a tip complex, which is formed by LcrV in Y. pestis. The structure of an LcrV triple mutant (K40A/D41A/K42A) in a C273S background has previously been reported to 2.2 Å resolution. Here, the crystal structure of LcrV without the triple mutation in a C273S background is reported at a higher resolution of 1.65 Å. Overall the two structures are similar, but there are also notable differences, particularly near the site of the triple mutation. The refined structure revealed a slight shift in the backbone positions of residues Gly28-Asn43 and displayed electron density in the loop region consisting of residues Ile46-Val63, which was disordered in the original structure. In addition, the helical turn region spanning residues Tyr77-Gln95 adopts a different orientation.

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Primary Citation of related structures