ISDA: 4J89

Deposition Date 2013-02-14

Release Date 2013-06-26

Last Version Date 2023-12-06

Entry Detail

PDB ID:

4J89

Keywords:

FLUORESCENT PROTEIN

Title:

Different photochemical events of a genetically encoded aryl azide define and modulate GFP fluorescence

Biological Source:

Source Organism:

Aequorea victoria (Taxon ID: 6100)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.10 Å

R-Value Free:

0.24

R-Value Work:

0.18

R-Value Observed:

0.18

Space Group:

P 21 21 21

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Green fluorescent protein
Gene (Uniprot):GFP
Mutagens:S30R, Y39N, Q80R, F99S, N105T, F145Y, M153T, V163A, A171V, A206V
Chain IDs:A, B
Chain Length:245
Number of Molecules:2
Biological Source:Aequorea victoria

UniProt ID:P42212 Pfam ID:PF01353

Modified Residue

Compound ID	Chain ID	Parent Comp ID	Details	2D Image
CQ2	A	GLY	?

Ligand Molecules

EDO

SO4

TRS

Primary Citation

Different Photochemical Events of a Genetically Encoded Phenyl Azide Define and Modulate GFP Fluorescence.

Reddington, S.C, Rizkallah, P.J, Watson, P.D, Pearson, R, Tippmann, E.M, Jones, D.D.Show

Angew.Chem.Int.Ed.Engl. 52 5974 5977 (2013)

PMID: 23620472 DOI: 10.1002/anie.201301490

Abstact

Expanding the genetic code opens new avenues to modulate protein function in real time. By genetically incorporating photoreactive phenyl azide, the fluorescent properties of green fluorescent protein (GFP) can be modulated by light. Depending on the residue in GFP programmed to incorporate the phenyl azide, different effects on function and photochemical pathways are observed.

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Protein

Chemical

Disease

Primary Citation of related structures