4J6E image
Deposition Date 2013-02-11
Release Date 2013-05-08
Last Version Date 2024-02-28
Entry Detail
PDB ID:
4J6E
Keywords:
Title:
Structure of LPXI D225A Mutant
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.52 Å
R-Value Free:
0.28
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 61 2 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:UDP-2,3-diacylglucosamine pyrophosphatase LpxI
Mutagens:D225A
Chain IDs:A
Chain Length:283
Number of Molecules:1
Biological Source:Caulobacter crescentus
Ligand Molecules
Primary Citation
LpxI structures reveal how a lipid A precursor is synthesized.
Nat.Struct.Mol.Biol. 19 1132 1138 (2012)
PMID: 23042606 DOI: 10.1038/nsmb.2393

Abstact

Enzymes in lipid metabolism acquire and deliver hydrophobic substrates and products from within lipid bilayers. The structure at 2.55 Å of one isozyme of a constitutive enzyme in lipid A biosynthesis, LpxI from Caulobacter crescentus, has a novel fold. Two domains close around a completely sequestered substrate, UDP-2,3-diacylglucosamine, and open to release products either to the neighboring enzyme in a putative multienzyme complex or to the bilayer. Mutation analysis identifies Asp225 as key to Mg(2+)-catalyzed diphosphate hydrolysis. These structures provide snapshots of the enzymatic synthesis of a critical lipid A precursor.

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Protein

Chemical

Disease

Primary Citation of related structures