4J5X image
Deposition Date 2013-02-10
Release Date 2013-08-21
Last Version Date 2024-02-28
Entry Detail
PDB ID:
4J5X
Title:
Crystal Structure of the SR12813-bound PXR/RXRalpha LBD Heterotetramer Complex
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.80 Å
R-Value Free:
0.29
R-Value Work:
0.24
R-Value Observed:
0.24
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Nuclear receptor subfamily 1 group I member 2, Nuclear receptor coactivator 1
Gene (Uniprot):NR1I2, NCOA1
Chain IDs:C (auth: A), D (auth: B)
Chain Length:336
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Retinoic acid receptor RXR-alpha, Nuclear receptor coactivator 1
Gene (Uniprot):RXRA, NCOA1
Chain IDs:A (auth: D), B (auth: C)
Chain Length:264
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Structural and Functional Analysis of the Human Nuclear Xenobiotic Receptor PXR in Complex with RXRalpha.
J.Mol.Biol. 425 2561 2577 (2013)
PMID: 23602807 DOI: 10.1016/j.jmb.2013.04.012

Abstact

The human nuclear xenobiotic receptor PXR recognizes a range of potentially harmful drugs and endobiotic chemicals but must complex with the nuclear receptor RXRα to control the expression of numerous drug metabolism genes. To date, the structural basis and functional consequences of this interaction have remained unclear. Here we present 2.8-Å-resolution crystal structures of the heterodimeric complex formed between the ligand-binding domains of human PXR and RXRα. These structures establish that PXR and RXRα form a heterotetramer unprecedented in the nuclear receptor family of ligand-regulated transcription factors. We further show that both PXR and RXRα bind to the transcriptional coregulator SRC-1 with higher affinity when they are part of the PXR/RXRα heterotetramer complex than they do when each ligand-binding domain is examined alone. Furthermore, we purify the full-length forms of each receptor from recombinant bacterial expression systems and characterize their interactions with a range of direct and everted repeat DNA elements. Taken together, these data advance our understanding of PXR, the master regulator of drug metabolism gene expression in humans, in its functional partnership with RXRα.

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