4J3O image
Deposition Date 2013-02-06
Release Date 2013-04-10
Last Version Date 2024-11-27
Entry Detail
PDB ID:
4J3O
Title:
Crystal structure of the FimD usher traversed by the pilus tip complex assembly composed of FimC:FimF:FimG:FimH
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.80 Å
R-Value Free:
0.29
R-Value Work:
0.24
R-Value Observed:
0.25
Space Group:
P 42 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Chaperone protein FimC
Gene (Uniprot):fimC
Chain IDs:C
Chain Length:211
Number of Molecules:1
Biological Source:Escherichia coli
Polymer Type:polypeptide(L)
Molecule:Outer membrane usher protein FimD
Gene (Uniprot):fimD
Chain IDs:E (auth: D)
Chain Length:843
Number of Molecules:1
Biological Source:Escherichia coli
Polymer Type:polypeptide(L)
Molecule:Protein FimF
Gene (Uniprot):fimF
Chain IDs:D (auth: F)
Chain Length:154
Number of Molecules:1
Biological Source:Escherichia coli
Polymer Type:polypeptide(L)
Molecule:Protein FimG
Gene (Uniprot):fimG
Chain IDs:A (auth: G)
Chain Length:144
Number of Molecules:1
Biological Source:Escherichia coli
Polymer Type:polypeptide(L)
Molecule:Protein FimH
Gene (Uniprot):fimH
Chain IDs:B (auth: H)
Chain Length:279
Number of Molecules:1
Biological Source:Escherichia coli
Ligand Molecules
Primary Citation
Structural and energetic basis of folded-protein transport by the FimD usher.
Nature 496 243 246 (2013)
PMID: 23579681 DOI: 10.1038/nature12007

Abstact

Type 1 pili, produced by uropathogenic Escherichia coli, are multisubunit fibres crucial in recognition of and adhesion to host tissues. During pilus biogenesis, subunits are recruited to an outer membrane assembly platform, the FimD usher, which catalyses their polymerization and mediates pilus secretion. The recent determination of the crystal structure of an initiation complex provided insight into the initiation step of pilus biogenesis resulting in pore activation, but very little is known about the elongation steps that follow. Here, to address this question, we determine the structure of an elongation complex in which the tip complex assembly composed of FimC, FimF, FimG and FimH passes through FimD. This structure demonstrates the conformational changes required to prevent backsliding of the nascent pilus through the FimD pore and also reveals unexpected properties of the usher pore. We show that the circular binding interface between the pore lumen and the folded substrate participates in transport by defining a low-energy pathway along which the nascent pilus polymer is guided during secretion.

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Primary Citation of related structures