4IVI image
Deposition Date 2013-01-23
Release Date 2013-06-19
Last Version Date 2024-11-20
Entry Detail
PDB ID:
4IVI
Keywords:
Title:
Crystal structure of a family VIII carboxylesterase.
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.19
R-Value Work:
0.18
Space Group:
I 4 2 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Carboxylesterase
Chain IDs:A
Chain Length:434
Number of Molecules:1
Biological Source:uncultured bacterium
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET SELENOMETHIONINE
Ligand Molecules
Primary Citation
Structural basis for the beta-lactamase activity of EstU1, a family VIII carboxylesterase.
Proteins 81 2045 2051 (2013)
PMID: 23737193 DOI: 10.1002/prot.24334

Abstact

EstU1 is a unique family VIII carboxylesterase that displays hydrolytic activity toward the amide bond of clinically used β-lactam antibiotics as well as the ester bond of p-nitrophenyl esters. EstU1 assumes a β-lactamase-like modular architecture and contains the residues Ser100, Lys103, and Tyr218, which correspond to the three catalytic residues (Ser64, Lys67, and Tyr150, respectively) of class C β-lactamases. The structure of the EstU1/cephalothin complex demonstrates that the active site of EstU1 is not ideally tailored to perform an efficient deacylation reaction during the hydrolysis of β-lactam antibiotics. This result explains the weak β-lactamase activity of EstU1 compared with class C β-lactamases. Finally, structural and sequential comparison of EstU1 with other family VIII carboxylesterases elucidates an operative molecular strategy used by family VIII carboxylesterases to extend their substrate spectrum.

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Primary Citation of related structures