4IUG image
Deposition Date 2013-01-21
Release Date 2013-07-31
Last Version Date 2024-11-20
Entry Detail
PDB ID:
4IUG
Keywords:
Title:
Crystal structure of beta-galactosidase from Aspergillus oryzae in complex with galactose
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.60 Å
R-Value Free:
0.21
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 32 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Beta-galactosidase A
Gene (Uniprot):lacA
Chain IDs:A
Chain Length:1005
Number of Molecules:1
Biological Source:Aspergillus oryzae
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
ASN A ASN GLYCOSYLATION SITE
SEP A SER PHOSPHOSERINE
Primary Citation
The crystal structure of acidic beta-galactosidase from Aspergillus oryzae.
Int.J.Biol.Macromol. 60C 109 115 (2013)
PMID: 23688418 DOI: 10.1016/j.ijbiomac.2013.05.003

Abstact

The crystal structure of the industrially important Aspergillus oryzae β-galactosidase has been determined at 2.60 Å resolution. The Ao-β-gal is a large (985 residues) monomeric multi-domain enzyme that has a catalytic (α/β)8-barrel domain. An electron density map revealed extensive N-glycosylation between the domain interfaces suggesting that the oligosaccharide-chains would have a stabilizing role for the structure of Ao-β-gal. Comparison of structure with other β-galactosidase structures of glycoside hydrolase family 35 revealed a number of hydrophobic residues, which may contribute favorably to the stabilization of the structure. The role of a high number of acidic residues in Ao-β-gal is also discussed.

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Primary Citation of related structures