4IUC image
Entry Detail
PDB ID:
4IUC
Keywords:
Title:
Crystal structure of an O2-tolerant [NiFe]-hydrogenase from Ralstonia eutropha in its as-isolated form - oxidized state 2
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2013-01-20
Release Date:
2014-04-02
Method Details:
Experimental Method:
Resolution:
1.45 Å
R-Value Free:
0.15
R-Value Work:
0.12
R-Value Observed:
0.12
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Uptake hydrogenase large subunit
Chain IDs:A (auth: L)
Chain Length:603
Number of Molecules:1
Biological Source:Ralstonia eutropha
Polymer Type:polypeptide(L)
Description:Uptake hydrogenase small subunit
Chain IDs:B (auth: S)
Chain Length:339
Number of Molecules:1
Biological Source:Ralstonia eutropha
Primary Citation
Reversible [4Fe-3S] cluster morphing in an O2-tolerant [NiFe] hydrogenase.
Nat.Chem.Biol. 10 378 385 (2014)
PMID: 24705592 DOI: 10.1038/nchembio.1500

Abstact

Hydrogenases catalyze the reversible oxidation of H(2) into protons and electrons and are usually readily inactivated by O(2). However, a subgroup of the [NiFe] hydrogenases, including the membrane-bound [NiFe] hydrogenase from Ralstonia eutropha, has evolved remarkable tolerance toward O(2) that enables their host organisms to utilize H(2) as an energy source at high O(2). This feature is crucially based on a unique six cysteine-coordinated [4Fe-3S] cluster located close to the catalytic center, whose properties were investigated in this study using a multidisciplinary approach. The [4Fe-3S] cluster undergoes redox-dependent reversible transformations, namely iron swapping between a sulfide and a peptide amide N. Moreover, our investigations unraveled the redox-dependent and reversible occurence of an oxygen ligand located at a different iron. This ligand is hydrogen bonded to a conserved histidine that is essential for H(2) oxidation at high O(2). We propose that these transformations, reminiscent of those of the P-cluster of nitrogenase, enable the consecutive transfer of two electrons within a physiological potential range.

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