4IQK image
Entry Detail
PDB ID:
4IQK
Keywords:
Title:
Crystal structure of cpd 16 bound to Keap1 Kelch domain
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2013-01-11
Release Date:
2013-05-15
Method Details:
Experimental Method:
Resolution:
1.97 Å
R-Value Free:
0.17
R-Value Work:
0.15
R-Value Observed:
0.15
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Kelch-like ECH-associated protein 1
Mutations:E540A, E542A
Chain IDs:A
Chain Length:299
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Small molecules inhibit the interaction of Nrf2 and the Keap1 Kelch domain through a non-covalent mechanism.
Bioorg.Med.Chem. 21 4011 4019 (2013)
PMID: 23647822 DOI: 10.1016/j.bmc.2013.04.019

Abstact

Keap1 binds to the Nrf2 transcription factor to promote its degradation, resulting in the loss of gene products that protect against oxidative stress. While cell-active small molecules have been identified that modify cysteines in Keap1 and effect the Nrf2 dependent pathway, few act through a non-covalent mechanism. We have identified and characterized several small molecule compounds that specifically bind to the Keap1 Kelch-DC domain as measured by NMR, native mass spectrometry and X-ray crystallography. One compound upregulates Nrf2 response genes measured by a luciferase cell reporter assay. The non-covalent inhibition strategy presents a reasonable course of action to avoid toxic side-effects due to non-specific cysteine modification.

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Primary Citation of related structures