4ILD image
Entry Detail
PDB ID:
4ILD
Keywords:
Title:
Crystal structure of truncated Bovine viral diarrhea virus 1 E2 envelope protein
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2012-12-30
Release Date:
2013-04-10
Method Details:
Experimental Method:
Resolution:
3.27 Å
R-Value Free:
0.28
R-Value Work:
0.24
R-Value Observed:
0.24
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Envelope glycoprotein E2
Chain IDs:A, B
Chain Length:253
Number of Molecules:2
Biological Source:Bovine viral diarrhea virus 1-NADL
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
ASN A ASN GLYCOSYLATION SITE
Primary Citation
Crystal structure of glycoprotein E2 from bovine viral diarrhea virus.
Proc.Natl.Acad.Sci.USA 110 6805 6810 (2013)
PMID: 23569276 DOI: 10.1073/pnas.1300524110

Abstact

Pestiviruses, including bovine viral diarrhea virus, are important animal pathogens and are closely related to hepatitis C virus, which remains a major global health threat. They have an outer lipid envelope bearing two glycoproteins, E1 and E2, required for cell entry. They deliver their genome into the host cell cytoplasm by fusion of their envelope with a cellular membrane. The crystal structure of bovine viral diarrhea virus E2 reveals a unique protein architecture consisting of two Ig-like domains followed by an elongated β-stranded domain with a new fold. E2 forms end-to-end homodimers with a conserved C-terminal motif rich in aromatic residues at the contact. A disulfide bond across the interface explains the acid resistance of pestiviruses and their requirement for a redox activation step to initiate fusion. From the structure of E2, we propose alternative possible membrane fusion mechanisms. We expect the pestivirus fusion apparatus to be conserved in hepatitis C virus.

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