4IGB image
Deposition Date 2012-12-17
Release Date 2013-06-05
Last Version Date 2024-03-20
Entry Detail
PDB ID:
4IGB
Keywords:
Title:
Crystal structure of the N-terminal domain of the Streptococcus gordonii adhesin Sgo0707
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.09 Å
R-Value Free:
0.22
R-Value Work:
0.17
R-Value Observed:
0.18
Space Group:
I 2 2 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:LPXTG cell wall surface protein
Gene (Uniprot):SGO_0707
Chain IDs:A
Chain Length:430
Number of Molecules:1
Biological Source:Streptococcus gordonii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:LPXTG cell wall surface protein
Gene (Uniprot):SGO_0707
Chain IDs:B
Chain Length:435
Number of Molecules:1
Biological Source:Streptococcus gordonii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:LPXTG cell wall surface protein
Gene (Uniprot):SGO_0707
Chain IDs:C
Chain Length:436
Number of Molecules:1
Biological Source:Streptococcus gordonii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:LPXTG cell wall surface protein
Gene (Uniprot):SGO_0707
Chain IDs:D
Chain Length:423
Number of Molecules:1
Biological Source:Streptococcus gordonii
Primary Citation
Structural and Functional Analysis of the N-terminal Domain of the Streptococcus gordonii Adhesin Sgo0707
Plos One 8 e63768 e63768 (2013)
PMID: 23691093 DOI: 10.1371/journal.pone.0063768

Abstact

The commensal Streptococcus gordonii expresses numerous surface adhesins with which it interacts with other microorganisms, host cells and salivary proteins to initiate dental plaque formation. However, this Gram-positive bacterium can also spread to non-oral sites such as the heart valves and cause infective endocarditis. One of its surface adhesins, Sgo0707, is a large protein composed of a non-repetitive N-terminal region followed by several C-terminal repeat domains and a cell wall sorting motif. Here we present the crystal structure of the Sgo0707 N-terminal domains, refined to 2.1 Å resolution. The model consists of two domains, N1 and N2. The largest domain, N1, comprises a putative binding cleft with a single cysteine located in its centre and exhibits an unexpected structural similarity to the variable domains of the streptococcal Antigen I/II adhesins. The N2-domain has an IgG-like fold commonly found among Gram-positive surface adhesins. Binding studies performed on S. gordonii wild-type and a Sgo0707 deficient mutant show that the Sgo0707 adhesin is involved in binding to type-1 collagen and to oral keratinocytes.

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