4IE0 image
Entry Detail
PDB ID:
4IE0
Title:
Crystal structure of the human fat mass and obesity associated protein (FTO) in complex with pyridine-2,4-dicarboxylate (2,4-PDCA)
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2012-12-13
Release Date:
2013-04-03
Method Details:
Experimental Method:
Resolution:
2.53 Å
R-Value Free:
0.21
R-Value Work:
0.17
Space Group:
H 3
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Alpha-ketoglutarate-dependent dioxygenase FTO
Chain IDs:A
Chain Length:495
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Structural basis for inhibition of the fat mass and obesity associated protein (FTO)
J.Med.Chem. 56 3680 3688 (2013)
PMID: 23547775 DOI: 10.1021/jm400193d

Abstact

The fat mass and obesity associated protein (FTO) is a potential target for anti-obesity medicines. FTO is a 2-oxoglutarate (2OG)-dependent N-methyl nucleic acid demethylase that acts on substrates including 3-methylthymidine, 3-methyluracil, and 6-methyladenine. To identify FTO inhibitors, we screened a set of 2OG analogues and related compounds using differential scanning fluorometry- and liquid chromatography-based assays. The results revealed sets of both cyclic and acyclic 2OG analogues that are FTO inhibitors. Identified inhibitors include small molecules that have been used in clinical studies for the inhibition of other 2OG oxygenases. Crystallographic analyses reveal inhibition by 2OG cosubstrate or primary substrate competitors as well as compounds that bind across both cosubstrate and primary substrate binding sites. The results will aid the development of more potent and selective FTO inhibitors.

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