4I99 image
Deposition Date 2012-12-05
Release Date 2013-01-30
Last Version Date 2024-11-20
Entry Detail
PDB ID:
4I99
Title:
Crystal structure of the SmcHead bound to the C-winged helix domain of ScpA
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.30 Å
R-Value Free:
0.23
R-Value Work:
0.22
Space Group:
P 41
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Chromosome partition protein Smc
Gene (Uniprot):smc
Chain IDs:A, B
Chain Length:354
Number of Molecules:2
Biological Source:Pyrococcus furiosus
Polymer Type:polypeptide(L)
Molecule:Putative uncharacterized protein
Gene (Uniprot):PF1842
Chain IDs:C, D
Chain Length:87
Number of Molecules:2
Biological Source:Pyrococcus furiosus
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET SELENOMETHIONINE
Ligand Molecules
Primary Citation
An asymmetric SMC-kleisin bridge in prokaryotic condensin.
Nat.Struct.Mol.Biol. 20 371 379 (2013)
PMID: 23353789 DOI: 10.1038/nsmb.2488

Abstact

Eukaryotic structural maintenance of chromosomes (SMC)-kleisin complexes form large, ring-shaped assemblies that promote accurate chromosome segregation. Their asymmetric structural core comprises SMC heterodimers that associate with both ends of a kleisin subunit. However, prokaryotic condensin Smc-ScpAB is composed of symmetric Smc homodimers associated with the kleisin ScpA in a postulated symmetrical manner. Here, we demonstrate that Smc molecules have two distinct binding sites for ScpA. The N terminus of ScpA binds the Smc coiled coil, whereas the C terminus binds the Smc ATPase domain. We show that in Bacillus subtilis cells, an Smc dimer is bridged by a single ScpAB to generate asymmetric tripartite rings analogous to eukaryotic SMC complexes. We define a molecular mechanism that ensures asymmetric assembly, and we conclude that the basic architecture of SMC-kleisin rings evolved before the emergence of eukaryotes.

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Primary Citation of related structures