ISDA: 4I7F

Deposition Date 2012-11-30

Release Date 2013-02-20

Last Version Date 2023-09-20

Entry Detail

PDB ID:

4I7F

Keywords:

HYDROLASE/HYDROLASE INHIBITOR

Title:

HIV-1 Reverse Transcriptase in complex with a phosphonate analog of nevirapine

Biological Source:

Source Organism:

HIV-1 M:B_HXB2R (Taxon ID: 11706)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.50 Å

R-Value Free:

0.26

R-Value Work:

0.22

Space Group:

C 2 2 21

Download Validation Report

Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Reverse transcriptase
Gene (Uniprot):gag-pol
Chain IDs:A
Chain Length:560
Number of Molecules:1
Biological Source:HIV-1 M:B_HXB2R

UniProt ID:P04585 Pfam ID:PF06817, PF00075, PF00078, PF06815

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Reverse transcriptase
Gene (Uniprot):gag-pol
Chain IDs:B
Chain Length:440
Number of Molecules:1
Biological Source:HIV-1 M:B_HXB2R

UniProt ID:P04585 Pfam ID:PF06817, PF00075, PF00078, PF06815

Ligand Molecules

NVE

SO4

Primary Citation

Synthesis and biological evaluation of phosphonate analogues of nevirapine.

Parrish, J, Tong, L, Wang, M, Chen, X, Lansdon, E.B, Cannizzaro, C, Zheng, X, Desai, M.C, Xu, L.Show

Bioorg.Med.Chem.Lett. 23 1493 1497 (2013)

PMID: 23375792 DOI: 10.1016/j.bmcl.2012.12.049

Abstact

A series of nevirapine-based analogues containing the phosphonate functionality were prepared and evaluated in vitro against HIV RT. The effect of the phosphonate was evaluated against the wild type and Y181C HIV replication. An in vivo PK study was performed on a select analogue.

Legend

Protein

Chemical

Disease

Primary Citation of related structures

Abstact

Feedback Form