4I49 image
Deposition Date 2012-11-27
Release Date 2013-01-09
Last Version Date 2023-09-20
Entry Detail
PDB ID:
4I49
Keywords:
Title:
Structure of ngNAGS bound with bisubstrate analog CoA-NAG
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.75 Å
R-Value Free:
0.27
R-Value Work:
0.18
R-Value Observed:
0.19
Space Group:
P 3 1 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Amino-acid acetyltransferase
Chain IDs:A
Chain Length:456
Number of Molecules:1
Biological Source:Neisseria gonorrhoeae SK-93-1035
Primary Citation
Structure of the complex of Neisseria gonorrhoeae N-acetyl-l-glutamate synthase with a bound bisubstrate analog.
Biochem.Biophys.Res.Commun. 430 1253 1258 (2013)
PMID: 23261468 DOI: 10.1016/j.bbrc.2012.12.064

Abstact

N-Acetyl-L-glutamate synthase catalyzes the conversion of AcCoA and glutamate to CoA and N-acetyl-L-glutamate (NAG), the first step of the arginine biosynthetic pathway in lower organisms. In mammals, NAG is an obligate cofactor of carbamoyl phosphate synthetase I in the urea cycle. We have previously reported the structures of NAGS from Neisseria gonorrhoeae (ngNAGS) with various substrates bound. Here we reported the preparation of the bisubstrate analog, CoA-S-acetyl-L-glutamate, the crystal structure of ngNAGS with CoA-NAG bound, and kinetic studies of several active site mutants. The results are consistent with a one-step nucleophilic addition-elimination mechanism with Glu353 as the catalytic base and Ser392 as the catalytic acid. The structure of the ngNAGS-bisubstrate complex together with the previous ngNAGS structures delineates the catalytic reaction path for ngNAGS.

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