4I0W image
Deposition Date 2012-11-19
Release Date 2013-04-03
Last Version Date 2024-10-30
Entry Detail
PDB ID:
4I0W
Keywords:
Title:
Structure of the Clostridium Perfringens CspB protease
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.60 Å
R-Value Free:
0.18
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Protease CspB
Chain IDs:A, C
Chain Length:96
Number of Molecules:2
Biological Source:Clostridium perfringens
Polymer Type:polypeptide(L)
Molecule:Protease CspB
Chain IDs:B, D
Chain Length:477
Number of Molecules:2
Biological Source:Clostridium perfringens
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE B MET SELENOMETHIONINE
Primary Citation
Structural and functional analysis of the CspB protease required for Clostridium spore germination.
Plos Pathog. 9 e1003165 e1003165 (2013)
PMID: 23408892 DOI: 10.1371/journal.ppat.1003165

Abstact

Spores are the major transmissive form of the nosocomial pathogen Clostridium difficile, a leading cause of healthcare-associated diarrhea worldwide. Successful transmission of C. difficile requires that its hardy, resistant spores germinate into vegetative cells in the gastrointestinal tract. A critical step during this process is the degradation of the spore cortex, a thick layer of peptidoglycan surrounding the spore core. In Clostridium sp., cortex degradation depends on the proteolytic activation of the cortex hydrolase, SleC. Previous studies have implicated Csps as being necessary for SleC cleavage during germination; however, their mechanism of action has remained poorly characterized. In this study, we demonstrate that CspB is a subtilisin-like serine protease whose activity is essential for efficient SleC cleavage and C. difficile spore germination. By solving the first crystal structure of a Csp family member, CspB, to 1.6 Å, we identify key structural domains within CspB. In contrast with all previously solved structures of prokaryotic subtilases, the CspB prodomain remains tightly bound to the wildtype subtilase domain and sterically occludes a catalytically competent active site. The structure, combined with biochemical and genetic analyses, reveals that Csp proteases contain a unique jellyroll domain insertion critical for stabilizing the protease in vitro and in C. difficile. Collectively, our study provides the first molecular insight into CspB activity and function. These studies may inform the development of inhibitors that can prevent clostridial spore germination and thus disease transmission.

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Primary Citation of related structures