4HWR image
Deposition Date 2012-11-08
Release Date 2013-09-18
Last Version Date 2024-02-28
Entry Detail
PDB ID:
4HWR
Title:
Crystal structure of E. coli Threonyl-tRNA synthetase bound to a novel inhibitor
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.90 Å
R-Value Free:
0.30
R-Value Work:
0.26
R-Value Observed:
0.26
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Threonine--tRNA ligase
Gene (Uniprot):thrS
Chain IDs:A, B
Chain Length:411
Number of Molecules:2
Biological Source:Escherichia coli
Primary Citation
Identification of bacteria-selective threonyl-tRNA synthetase substrate inhibitors by structure-based design.
J.Med.Chem. 56 1748 1760 (2013)
PMID: 23362938 DOI: 10.1021/jm301756m

Abstact

A series of potent and bacteria-selective threonyl-tRNA synthetase (ThrRS) inhibitors have been identified using structure-based drug design. These compounds occupied the substrate binding site of ThrRS and showed excellent binding affinities for all of the bacterial orthologues tested. Some of the compounds displayed greatly improved bacterial selectivity. Key residues responsible for potency and bacteria/human ThrRS selectivity have been identified. Antimicrobial activity has been achieved against wild-type Haemophilus influenzae and efflux-deficient mutants of Escherichia coli and Burkholderia thailandensis.

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