4HTA image
Deposition Date 2012-11-01
Release Date 2013-02-27
Last Version Date 2024-03-20
Entry Detail
PDB ID:
4HTA
Keywords:
Title:
The structure of the karrikin insensitive (KAI2) protein in Arabidopsis thaliana
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.90 Å
R-Value Free:
0.17
R-Value Work:
0.15
R-Value Observed:
0.15
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Hydrolase, alpha/beta fold family protein
Gene (Uniprot):KAI2
Chain IDs:A
Chain Length:288
Number of Molecules:1
Biological Source:Arabidopsis thaliana
Primary Citation
The Structure of the Karrikin-Insensitive Protein (KAI2) in Arabidopsis thaliana
Plos One 8 e54758 e54758 (2013)
PMID: 23349965 DOI: 10.1371/journal.pone.0054758

Abstact

KARRIKIN INSENSITIVE 2 (KAI2) is an α/β hydrolase involved in seed germination and seedling development. It is essential for plant responses to karrikins, a class of butenolide compounds derived from burnt plant material that are structurally similar to strigolactone plant hormones. The mechanistic basis for the function of KAI2 in plant development remains unclear. We have determined the crystal structure of Arabidopsis thaliana KAI2 in space groups P2(1) 2(1) 2(1) (a =63.57 Å, b =66.26 Å, c =78.25 Å) and P2(1) (a =50.20 Å, b =56.04 Å, c =52.43 Å, β =116.12°) to 1.55 and 2.11 Å respectively. The catalytic residues are positioned within a large hydrophobic pocket similar to that of DAD2, a protein required for strigolactone response in Petunia hybrida. KAI2 possesses a second solvent-accessible pocket, adjacent to the active site cavity, which offers the possibility of allosteric regulation. The structure of KAI2 is consistent with its designation as a serine hydrolase, as well as previous data implicating the protein in karrikin and strigolactone signalling.

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