4HQ9 image
Entry Detail
PDB ID:
4HQ9
Title:
Crystal structure of a green-to-red photoconvertible DRONPA, pcDRONPA in the green-off-state
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2012-10-25
Release Date:
2013-11-13
Method Details:
Experimental Method:
Resolution:
2.07 Å
R-Value Free:
0.23
R-Value Work:
0.18
R-Value Observed:
0.19
Space Group:
P 2 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Fluorescent protein Dronpa
Mutations:V60A, C62H, N94S, N102I, E218G
Chain IDs:A, B, C, D, E, F
Chain Length:260
Number of Molecules:6
Biological Source:Echinophyllia
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
CR8 A HIS ?
Primary Citation
Green-to-red photoconvertible Dronpa mutant for multimodal super-resolution fluorescence microscopy
ACS Nano 8 1664 1673 (2014)
PMID: 24410188 DOI: 10.1021/nn4060144

Abstact

Advanced imaging techniques crucially depend on the labels used. In this work, we present the structure-guided design of a fluorescent protein that displays both reversibly photochromic and green-to-red photoconversion behavior. We first designed ffDronpa, a mutant of the photochromic fluorescent protein Dronpa that matures up to three times faster while retaining its interesting photochromic features. Using a combined evolutionary and structure-driven rational design strategy, we developed a green-to-red photoconvertible ffDronpa mutant, called pcDronpa, and explored different optimization strategies that resulted in its improved version, pcDronpa2. This fluorescent probe combines a high brightness with low photobleaching and photoblinking. We herein show that, despite its tetrameric nature, pcDronpa2 allows for multimodal subdiffraction imaging by sequentially imaging a given sample using both super-resolution fluctuation imaging and localization microscopy.

Legend

Protein

Chemical

Disease

Primary Citation of related structures