4HN5 image
Deposition Date 2012-10-18
Release Date 2012-12-12
Last Version Date 2024-02-28
Entry Detail
PDB ID:
4HN5
Title:
GR DNA Binding Domain - TSLP nGRE Complex
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.90 Å
R-Value Free:
0.23
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Glucocorticoid receptor
Gene (Uniprot):NR3C1
Chain IDs:A, D (auth: B)
Chain Length:117
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(*CP*GP*CP*CP*TP*CP*CP*GP*GP*GP*AP*GP*AP*GP*CP*T)-3')
Chain IDs:B (auth: C)
Chain Length:16
Number of Molecules:1
Biological Source:synthetic construct
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(*AP*GP*CP*TP*CP*TP*CP*CP*CP*GP*GP*AP*GP*GP*CP*G)-3')
Chain IDs:C (auth: D)
Chain Length:16
Number of Molecules:1
Biological Source:synthetic construct
Ligand Molecules
Primary Citation
The structural basis of direct glucocorticoid-mediated transrepression.
Nat.Struct.Mol.Biol. 20 53 58 (2013)
PMID: 23222642 DOI: 10.1038/nsmb.2456

Abstact

A newly discovered negative glucocorticoid response element (nGRE) mediates DNA-dependent transrepression by the glucocorticoid receptor (GR) across the genome and has a major role in immunosuppressive therapy. The nGRE differs dramatically from activating response elements, and the mechanism driving GR binding and transrepression is unknown. To unravel the mechanism of nGRE-mediated transrepression by the GR, we characterized the interaction between GR and an nGRE in the thymic stromal lymphopoietin (TSLP) promoter. We show using structural and mechanistic approaches that nGRE binding is a new mode of sequence recognition by human GR and that nGREs prevent receptor dimerization through a unique GR-binding orientation and strong negative cooperativity, ensuring the presence of monomeric GR at repressive elements.

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Primary Citation of related structures