4HFZ image
Entry Detail
PDB ID:
4HFZ
Keywords:
Title:
Crystal Structure of an MDM2/P53 Peptide Complex
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2012-10-05
Release Date:
2013-07-31
Method Details:
Experimental Method:
Resolution:
2.69 Å
R-Value Free:
0.24
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 43 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:E3 ubiquitin-protein ligase Mdm2
Mutations:E69A, K70A
Chain IDs:A, C
Chain Length:109
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Cellular tumor antigen p53
Chain IDs:B, D
Chain Length:15
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
The structure of an MDM2-Nutlin-3a complex solved by the use of a validated MDM2 surface-entropy reduction mutant.
Acta Crystallogr.,Sect.D 69 1358 1366 (2013)
PMID: 23897459 DOI: 10.1107/S0907444913004459

Abstact

The p53-binding site of MDM2 holds great promise as a target for therapeutic intervention in MDM2-amplified p53 wild-type forms of cancer. Despite the extensive validation of this strategy, there are relatively few crystallographically determined co-complex structures for small-molecular inhibitors of the MDM2-p53 interaction available in the PDB. Here, a surface-entropy reduction mutant of the N-terminal domain of MDM2 that has been designed to enhance crystallogenesis is presented. This mutant has been validated by comparative ligand-binding studies using differential scanning fluorimetry and fluorescence polarization anisotropy and by cocrystallization with a peptide derived from p53. Using this mutant, the cocrystal structure of MDM2 with the benchmark inhibitor Nutlin-3a has been determined, revealing subtle differences from the previously described co-complex of MDM2 with Nutlin-2.

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Primary Citation of related structures