4H8I image
Deposition Date 2012-09-22
Release Date 2013-09-25
Last Version Date 2024-11-27
Entry Detail
PDB ID:
4H8I
Title:
Structure of GluK2-LBD in complex with GluAzo
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.20
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 61 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Glutamate receptor, ionotropic kainate 2
Gene (Uniprot):Grik2
Chain IDs:A, B
Chain Length:259
Number of Molecules:2
Biological Source:Rattus norvegicus
Primary Citation
A photoswitchable neurotransmitter analogue bound to its receptor.
Biochemistry 52 8972 8974 (2013)
PMID: 24295282 DOI: 10.1021/bi4014402

Abstact

Incorporation of the azobenzene derivative gluazo, a synthetic photochromic ligand, into a kainate receptor allows for the optical control of neuronal activity. The crystal structure of gluazo bound to a dimeric GluK2 ligand-binding domain reveals one monomer in a closed conformation, occupied by gluazo, and the other in an open conformation, with a bound buffer molecule. The glutamate group of gluazo interacts like the natural glutamate ligand, while its trans-azobenzene moiety protrudes into a tunnel. This elongated cavity presumably cannot accommodate a cis-azobenzene, which explains the reversible activation of the receptor upon photoisomerization.

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Primary Citation of related structures