4H6Y image
Deposition Date 2012-09-19
Release Date 2013-03-13
Last Version Date 2024-02-28
Entry Detail
PDB ID:
4H6Y
Title:
Crystal structure of the DH-PH-PH domain of FARP1
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
4.09 Å
R-Value Free:
0.31
R-Value Work:
0.28
R-Value Observed:
0.29
Space Group:
P 32
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:FERM, RhoGEF and pleckstrin domain-containing protein 1
Gene (Uniprot):FARP1
Chain IDs:A, B
Chain Length:501
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Structural Basis for Autoinhibition of the Guanine Nucleotide Exchange Factor FARP2.
Structure 21 355 364 (2013)
PMID: 23375260 DOI: 10.1016/j.str.2013.01.001

Abstact

FARP2 is a Dbl-family guanine nucleotide exchange factor (GEF) that contains a 4.1, ezrin, radixin and moesin (FERM) domain, a Dbl-homology (DH) domain and two pleckstrin homology (PH) domains. FARP2 activates Rac1 or Cdc42 in response to upstream signals, thereby regulating processes such as neuronal axon guidance and bone homeostasis. How the GEF activity of FARP2 is regulated remained poorly understood. We have determined the crystal structures of the catalytic DH domain and the DH-PH-PH domains of FARP2. The structures reveal an auto-inhibited conformation in which the GEF substrate-binding site is blocked collectively by the last helix in the DH domain and the two PH domains. This conformation is stabilized by multiple interactions among the domains and two well-structured inter-domain linkers. Our cell-based activity assays confirm the suppression of the FARP2 GEF activity by these auto-inhibitory elements.

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Primary Citation of related structures