4H5B image
Deposition Date 2012-09-18
Release Date 2013-01-30
Last Version Date 2024-02-28
Entry Detail
PDB ID:
4H5B
Title:
Crystal Structure of DR_1245 from Deinococcus radiodurans
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.19
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 65
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:DR_1245 protein
Gene (Uniprot):DR_1245
Chain IDs:A, B
Chain Length:153
Number of Molecules:2
Biological Source:Deinococcus radiodurans
Primary Citation
The Deinococcus radiodurans DR1245 Protein, a DdrB Partner Homologous to YbjN Proteins and Reminiscent of Type III Secretion System Chaperones.
Plos One 8 e56558 e56558 (2013)
PMID: 23441204 DOI: 10.1371/journal.pone.0056558

Abstact

The bacterium Deinococcus radiodurans exhibits an extreme resistance to ionizing radiation. A small subset of Deinococcus genus-specific genes were shown to be up-regulated upon exposure to ionizing radiation and to play a role in genome reconstitution. These genes include an SSB-like protein called DdrB. Here, we identified a novel protein encoded by the dr1245 gene as an interacting partner of DdrB. A strain devoid of the DR1245 protein is impaired in growth, exhibiting a generation time approximately threefold that of the wild type strain while radioresistance is not affected. We determined the three-dimensional structure of DR1245, revealing a relationship with type III secretion system chaperones and YbjN family proteins. Thus, DR1245 may display some chaperone activity towards DdrB and possibly other substrates.

Legend

Protein

Chemical

Disease

Primary Citation of related structures