4H0F image
Deposition Date 2012-09-08
Release Date 2013-09-04
Last Version Date 2023-09-13
Entry Detail
PDB ID:
4H0F
Keywords:
Title:
Mutant Structure of laminin-binding adhesin (Lmb) from Streptococcus agalactiae
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.40 Å
R-Value Free:
0.28
R-Value Work:
0.24
R-Value Observed:
0.24
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Laminin-binding surface protein
Gene (Uniprot):lmb
Mutations:delta(G123-L138)
Chain IDs:A, B
Chain Length:264
Number of Molecules:2
Biological Source:Streptococcus agalactiae
Ligand Molecules
Primary Citation
Metal binding is critical for the folding and function of laminin binding protein, Lmb of Streptococcus agalactiae.
Plos One 8 e67517 e67517 (2013)
PMID: 23826314 DOI: 10.1371/journal.pone.0067517

Abstact

Lmb is a 34 kDa laminin binding surface adhesin of Streptococcus agalactiae. The structure of Lmb reported by us recently has shown that it consists of a metal binding crevice, in which a zinc ion is coordinated to three highly conserved histidines. To elucidate the structural and functional significance of the metal ion in Lmb, these histidines have been mutated to alanine and single, double and triple mutants were generated. These mutations resulted in insolubility of the protein and revealed altered secondary and tertiary structures, as evidenced by circular dichroism and fluorescence spectroscopy studies. The mutations also significantly decreased the binding affinity of Lmb to laminin, implicating the role played by the metal binding residues in maintaining the correct conformation of the protein for its binding to laminin. A highly disordered loop, proposed to be crucial for metal acquisition in homologous structures, was deleted in Lmb by mutation (ΔLmb) and its crystal structure was solved at 2.6 Å. The ΔLmb structure was identical to the native Lmb structure with a bound zinc ion and exhibited laminin binding activity similar to wild type protein, suggesting that the loop might not have an important role in metal acquisition or adhesion in Lmb. Targeted mutations of histidine residues confirmed the importance of the zinc binding crevice for the structure and function of the Lmb adhesin.

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Primary Citation of related structures