4GVP image
Deposition Date 2012-08-31
Release Date 2013-05-08
Last Version Date 2024-02-28
Entry Detail
PDB ID:
4GVP
Keywords:
Title:
Crystal Structure of the Response Regulator Protein VraR from Staphylococcus aureus
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.03 Å
R-Value Free:
0.22
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Response regulator protein vraR
Gene (Uniprot):vraR
Chain IDs:A, B, C, D
Chain Length:208
Number of Molecules:4
Biological Source:Staphylococcus aureus
Primary Citation
Phosphorylation-dependent conformational changes and domain rearrangements in Staphylococcus aureus VraR activation.
Proc.Natl.Acad.Sci.USA 110 8525 8530 (2013)
PMID: 23650349 DOI: 10.1073/pnas.1302819110

Abstact

Staphylococcus aureus VraR, a vancomycin-resistance-associated response regulator, activates a cell-wall-stress stimulon in response to antibiotics that inhibit cell wall formation. X-ray crystal structures of VraR in both unphosphorylated and beryllofluoride-activated states have been determined, revealing a mechanism of phosphorylation-induced dimerization that features a deep hydrophobic pocket at the center of the receiver domain interface. Unphosphorylated VraR exists in a closed conformation that inhibits dimer formation. Phosphorylation at the active site promotes conformational changes that are propagated throughout the receiver domain, promoting the opening of a hydrophobic pocket that is essential for homodimer formation and enhanced DNA-binding activity. This prominent feature in the VraR dimer can potentially be exploited for the development of novel therapeutics to counteract antibiotic resistance in this important pathogen.

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Primary Citation of related structures