4GMN image
Deposition Date 2012-08-16
Release Date 2012-10-31
Last Version Date 2024-02-28
Entry Detail
PDB ID:
4GMN
Title:
Structural basis of Rpl5 recognition by Syo1
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.95 Å
R-Value Free:
0.25
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
C 2 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Putative uncharacterized protein
Gene (Uniprot):HT_0033460
Chain IDs:B (auth: A)
Chain Length:676
Number of Molecules:1
Biological Source:Chaetomium thermophilum
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein l5-like protein
Gene (Uniprot):HT_0063640
Chain IDs:A (auth: B)
Chain Length:49
Number of Molecules:1
Biological Source:Chaetomium thermophilum
Ligand Molecules
Primary Citation
Synchronizing nuclear import of ribosomal proteins with ribosome assembly.
Science 338 666 671 (2012)
PMID: 23118189 DOI: 10.1126/science.1226960

Abstact

Ribosomal proteins are synthesized in the cytoplasm, before nuclear import and assembly with ribosomal RNA (rRNA). Little is known about coordination of nucleocytoplasmic transport with ribosome assembly. Here, we identify a transport adaptor, symportin 1 (Syo1), that facilitates synchronized coimport of the two 5S-rRNA binding proteins Rpl5 and Rpl11. In vitro studies revealed that Syo1 concomitantly binds Rpl5-Rpl11 and furthermore recruits the import receptor Kap104. The Syo1-Rpl5-Rpl11 import complex is released from Kap104 by RanGTP and can be directly transferred onto the 5S rRNA. Syo1 can shuttle back to the cytoplasm by interaction with phenylalanine-glycine nucleoporins. X-ray crystallography uncovered how the α-solenoid symportin accommodates the Rpl5 amino terminus, normally bound to 5S rRNA, in an extended groove. Symportin-mediated coimport of Rpl5-Rpl11 could ensure coordinated and stoichiometric incorporation of these proteins into pre-60S ribosomes.

Legend

Protein

Chemical

Disease

Primary Citation of related structures