4GL7 image
Deposition Date 2012-08-13
Release Date 2012-09-12
Last Version Date 2024-02-28
Entry Detail
PDB ID:
4GL7
Title:
Structure of human placental aromatase complexed with designed inhibitor HDDG046 (compound 5)
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Resolution:
3.90 Å
R-Value Free:
0.25
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 32 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Cytochrome P450 19A1
Gene (Uniprot):CYP19A1
Chain IDs:A
Chain Length:503
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Novel aromatase inhibitors by structure-guided design.
J.Med.Chem. 55 8464 8476 (2012)
PMID: 22951074 DOI: 10.1021/jm300930n

Abstact

Human cytochrome P450 aromatase catalyzes with high specificity the synthesis of estrogens from androgens. Aromatase inhibitors (AIs) such as exemestane, 6-methylideneandrosta-1,4-diene-3,17-dione, are preeminent drugs for the treatment of estrogen-dependent breast cancer. The crystal structure of human placental aromatase has shown an androgen-specific active site. By utilization of the structural data, novel C6-substituted androsta-1,4-diene-3,17-dione inhibitors have been designed. Several of the C6-substituted 2-alkynyloxy compounds inhibit purified placental aromatase with IC(50) values in the nanomolar range. Antiproliferation studies in a MCF-7 breast cancer cell line demonstrate that some of these compounds have EC(50) values better than 1 nM, exceeding that for exemestane. X-ray structures of aromatase complexes of two potent compounds reveal that, per their design, the novel side groups protrude into the opening to the access channel unoccupied in the enzyme-substrate/exemestane complexes. The observed structure-activity relationship is borne out by the X-ray data. Structure-guided design permits utilization of the aromatase-specific interactions for the development of next generation AIs.

Legend

Protein

Chemical

Disease

Primary Citation of related structures