4GKZ image
Deposition Date 2012-08-13
Release Date 2012-11-07
Last Version Date 2024-11-27
Entry Detail
PDB ID:
4GKZ
Keywords:
Title:
HA1.7, a MHC class II restricted TCR specific for haemagglutinin
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.39 Å
R-Value Free:
0.29
R-Value Work:
0.24
R-Value Observed:
0.25
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Alpha chain of Class II TCR
Chain IDs:A
Chain Length:202
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Beta Chain of Class II TCR
Chain IDs:B
Chain Length:241
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Minimal conformational plasticity enables TCR cross-reactivity to different MHC class II heterodimers.
Sci Rep 2 629 629 (2012)
PMID: 22953050 DOI: 10.1038/srep00629

Abstact

Successful immunity requires that a limited pool of αβ T-cell receptors (TCRs) provide cover for a vast number of potential foreign peptide antigens presented by 'self' major histocompatibility complex (pMHC) molecules. Structures of unligated and ligated MHC class-I-restricted TCRs with different ligands, supplemented with biophysical analyses, have revealed a number of important mechanisms that govern TCR mediated antigen recognition. HA1.7 TCR binding to the influenza hemagglutinin antigen (HA(306-318)) presented by HLA-DR1 or HLA-DR4 represents an ideal system for interrogating pMHC-II antigen recognition. Accordingly, we solved the structure of the unligated HA1.7 TCR and compared it to both complex structures. Despite a relatively rigid binding mode, HA1.7 T-cells could tolerate mutations in key contact residues within the peptide epitope. Thermodynamic analysis revealed that limited plasticity and extreme favorable entropy underpinned the ability of the HA1.7 T-cell clone to cross-react with HA(306-318) presented by multiple MHC-II alleles.

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Primary Citation of related structures